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Lime 0 2 0 1 Matlab R2021a Image Processing Toolbox, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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MathWorks Inc matlab-based program redox ratio analysis (rra)
Functional characterization of HyPer7 as H 2 O 2 sensor in 3 DAG gemmae. (A) Plate reader measurements of HyPer7 fluorescence intensity in 3 DAG gemmae. After 10 min, gemmae were submersed in medium with different H 2 O 2 concentrations (0.25–10 mM) for 10 min, followed by recovery measurements for 100 min. Error bars represent standard deviation, calculated from n ≥ 6. Values were normalized to the 488/405 ratio of the first time point. (B) Microscopic images of HyPer7 fluorescence in 3 DAG transgenic gemmae exposed to the H 2 O 2 series. The rainbow color scheme depicts the detected HyPer7 ratio 488/405 range from low (blue) to high (red) H 2 O 2 <t>concentrations.</t> <t>Ratiometric</t> images visualize spectral changes in response to increasing H 2 O 2 concentrations ( n > 7). Scale bars, overview: 100 μm, insets: 50 μm. Images are maximum intensity Z ‐stack projections processed using <t>RRA</t> software. Insets represent single slice images of corresponding overview Z ‐stack projections. Arrows indicate higher oxidized meristematic zones, disappearing after 2 mM treatments. (C) HyPer7 ratios from the meristematic region (mr) and surrounding differentiated tissue (dt) were determined using representative images ( n = 7) shown in (B). (D) Phenotypic analysis of WT plants after cultivation for 3 days, followed by 10 min H₂O₂ treatment and recovery for 4 days. Plants treated with 10 mM H₂O₂ were non‐viable and excluded from further analysis. Scale bar: 500 μm. (E) Quantitative assessment of the optical surface area of 7‐day‐old WT plants after H₂O₂ treatments ( n > 35). Data are represented as mean ± standard deviation. Statistical significance was determined using the single ANOVA test followed by Tukey ( P < 0.05).
Matlab Based Program Redox Ratio Analysis (Rra), supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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MathWorks Inc symbolic toolbox
Functional characterization of HyPer7 as H 2 O 2 sensor in 3 DAG gemmae. (A) Plate reader measurements of HyPer7 fluorescence intensity in 3 DAG gemmae. After 10 min, gemmae were submersed in medium with different H 2 O 2 concentrations (0.25–10 mM) for 10 min, followed by recovery measurements for 100 min. Error bars represent standard deviation, calculated from n ≥ 6. Values were normalized to the 488/405 ratio of the first time point. (B) Microscopic images of HyPer7 fluorescence in 3 DAG transgenic gemmae exposed to the H 2 O 2 series. The rainbow color scheme depicts the detected HyPer7 ratio 488/405 range from low (blue) to high (red) H 2 O 2 <t>concentrations.</t> <t>Ratiometric</t> images visualize spectral changes in response to increasing H 2 O 2 concentrations ( n > 7). Scale bars, overview: 100 μm, insets: 50 μm. Images are maximum intensity Z ‐stack projections processed using <t>RRA</t> software. Insets represent single slice images of corresponding overview Z ‐stack projections. Arrows indicate higher oxidized meristematic zones, disappearing after 2 mM treatments. (C) HyPer7 ratios from the meristematic region (mr) and surrounding differentiated tissue (dt) were determined using representative images ( n = 7) shown in (B). (D) Phenotypic analysis of WT plants after cultivation for 3 days, followed by 10 min H₂O₂ treatment and recovery for 4 days. Plants treated with 10 mM H₂O₂ were non‐viable and excluded from further analysis. Scale bar: 500 μm. (E) Quantitative assessment of the optical surface area of 7‐day‐old WT plants after H₂O₂ treatments ( n > 35). Data are represented as mean ± standard deviation. Statistical significance was determined using the single ANOVA test followed by Tukey ( P < 0.05).
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Functional characterization of HyPer7 as H 2 O 2 sensor in 3 DAG gemmae. (A) Plate reader measurements of HyPer7 fluorescence intensity in 3 DAG gemmae. After 10 min, gemmae were submersed in medium with different H 2 O 2 concentrations (0.25–10 mM) for 10 min, followed by recovery measurements for 100 min. Error bars represent standard deviation, calculated from n ≥ 6. Values were normalized to the 488/405 ratio of the first time point. (B) Microscopic images of HyPer7 fluorescence in 3 DAG transgenic gemmae exposed to the H 2 O 2 series. The rainbow color scheme depicts the detected HyPer7 ratio 488/405 range from low (blue) to high (red) H 2 O 2 <t>concentrations.</t> <t>Ratiometric</t> images visualize spectral changes in response to increasing H 2 O 2 concentrations ( n > 7). Scale bars, overview: 100 μm, insets: 50 μm. Images are maximum intensity Z ‐stack projections processed using <t>RRA</t> software. Insets represent single slice images of corresponding overview Z ‐stack projections. Arrows indicate higher oxidized meristematic zones, disappearing after 2 mM treatments. (C) HyPer7 ratios from the meristematic region (mr) and surrounding differentiated tissue (dt) were determined using representative images ( n = 7) shown in (B). (D) Phenotypic analysis of WT plants after cultivation for 3 days, followed by 10 min H₂O₂ treatment and recovery for 4 days. Plants treated with 10 mM H₂O₂ were non‐viable and excluded from further analysis. Scale bar: 500 μm. (E) Quantitative assessment of the optical surface area of 7‐day‐old WT plants after H₂O₂ treatments ( n > 35). Data are represented as mean ± standard deviation. Statistical significance was determined using the single ANOVA test followed by Tukey ( P < 0.05).
Ldl Decomposition, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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MathWorks Inc matlab r2014a software
Functional characterization of HyPer7 as H 2 O 2 sensor in 3 DAG gemmae. (A) Plate reader measurements of HyPer7 fluorescence intensity in 3 DAG gemmae. After 10 min, gemmae were submersed in medium with different H 2 O 2 concentrations (0.25–10 mM) for 10 min, followed by recovery measurements for 100 min. Error bars represent standard deviation, calculated from n ≥ 6. Values were normalized to the 488/405 ratio of the first time point. (B) Microscopic images of HyPer7 fluorescence in 3 DAG transgenic gemmae exposed to the H 2 O 2 series. The rainbow color scheme depicts the detected HyPer7 ratio 488/405 range from low (blue) to high (red) H 2 O 2 <t>concentrations.</t> <t>Ratiometric</t> images visualize spectral changes in response to increasing H 2 O 2 concentrations ( n > 7). Scale bars, overview: 100 μm, insets: 50 μm. Images are maximum intensity Z ‐stack projections processed using <t>RRA</t> software. Insets represent single slice images of corresponding overview Z ‐stack projections. Arrows indicate higher oxidized meristematic zones, disappearing after 2 mM treatments. (C) HyPer7 ratios from the meristematic region (mr) and surrounding differentiated tissue (dt) were determined using representative images ( n = 7) shown in (B). (D) Phenotypic analysis of WT plants after cultivation for 3 days, followed by 10 min H₂O₂ treatment and recovery for 4 days. Plants treated with 10 mM H₂O₂ were non‐viable and excluded from further analysis. Scale bar: 500 μm. (E) Quantitative assessment of the optical surface area of 7‐day‐old WT plants after H₂O₂ treatments ( n > 35). Data are represented as mean ± standard deviation. Statistical significance was determined using the single ANOVA test followed by Tukey ( P < 0.05).
Matlab R2014a Software, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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MathWorks Inc wireless access points
Functional characterization of HyPer7 as H 2 O 2 sensor in 3 DAG gemmae. (A) Plate reader measurements of HyPer7 fluorescence intensity in 3 DAG gemmae. After 10 min, gemmae were submersed in medium with different H 2 O 2 concentrations (0.25–10 mM) for 10 min, followed by recovery measurements for 100 min. Error bars represent standard deviation, calculated from n ≥ 6. Values were normalized to the 488/405 ratio of the first time point. (B) Microscopic images of HyPer7 fluorescence in 3 DAG transgenic gemmae exposed to the H 2 O 2 series. The rainbow color scheme depicts the detected HyPer7 ratio 488/405 range from low (blue) to high (red) H 2 O 2 <t>concentrations.</t> <t>Ratiometric</t> images visualize spectral changes in response to increasing H 2 O 2 concentrations ( n > 7). Scale bars, overview: 100 μm, insets: 50 μm. Images are maximum intensity Z ‐stack projections processed using <t>RRA</t> software. Insets represent single slice images of corresponding overview Z ‐stack projections. Arrows indicate higher oxidized meristematic zones, disappearing after 2 mM treatments. (C) HyPer7 ratios from the meristematic region (mr) and surrounding differentiated tissue (dt) were determined using representative images ( n = 7) shown in (B). (D) Phenotypic analysis of WT plants after cultivation for 3 days, followed by 10 min H₂O₂ treatment and recovery for 4 days. Plants treated with 10 mM H₂O₂ were non‐viable and excluded from further analysis. Scale bar: 500 μm. (E) Quantitative assessment of the optical surface area of 7‐day‐old WT plants after H₂O₂ treatments ( n > 35). Data are represented as mean ± standard deviation. Statistical significance was determined using the single ANOVA test followed by Tukey ( P < 0.05).
Wireless Access Points, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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MathWorks Inc load forecasting
Functional characterization of HyPer7 as H 2 O 2 sensor in 3 DAG gemmae. (A) Plate reader measurements of HyPer7 fluorescence intensity in 3 DAG gemmae. After 10 min, gemmae were submersed in medium with different H 2 O 2 concentrations (0.25–10 mM) for 10 min, followed by recovery measurements for 100 min. Error bars represent standard deviation, calculated from n ≥ 6. Values were normalized to the 488/405 ratio of the first time point. (B) Microscopic images of HyPer7 fluorescence in 3 DAG transgenic gemmae exposed to the H 2 O 2 series. The rainbow color scheme depicts the detected HyPer7 ratio 488/405 range from low (blue) to high (red) H 2 O 2 <t>concentrations.</t> <t>Ratiometric</t> images visualize spectral changes in response to increasing H 2 O 2 concentrations ( n > 7). Scale bars, overview: 100 μm, insets: 50 μm. Images are maximum intensity Z ‐stack projections processed using <t>RRA</t> software. Insets represent single slice images of corresponding overview Z ‐stack projections. Arrows indicate higher oxidized meristematic zones, disappearing after 2 mM treatments. (C) HyPer7 ratios from the meristematic region (mr) and surrounding differentiated tissue (dt) were determined using representative images ( n = 7) shown in (B). (D) Phenotypic analysis of WT plants after cultivation for 3 days, followed by 10 min H₂O₂ treatment and recovery for 4 days. Plants treated with 10 mM H₂O₂ were non‐viable and excluded from further analysis. Scale bar: 500 μm. (E) Quantitative assessment of the optical surface area of 7‐day‐old WT plants after H₂O₂ treatments ( n > 35). Data are represented as mean ± standard deviation. Statistical significance was determined using the single ANOVA test followed by Tukey ( P < 0.05).
Load Forecasting, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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MathWorks Inc optical fibers
Functional characterization of HyPer7 as H 2 O 2 sensor in 3 DAG gemmae. (A) Plate reader measurements of HyPer7 fluorescence intensity in 3 DAG gemmae. After 10 min, gemmae were submersed in medium with different H 2 O 2 concentrations (0.25–10 mM) for 10 min, followed by recovery measurements for 100 min. Error bars represent standard deviation, calculated from n ≥ 6. Values were normalized to the 488/405 ratio of the first time point. (B) Microscopic images of HyPer7 fluorescence in 3 DAG transgenic gemmae exposed to the H 2 O 2 series. The rainbow color scheme depicts the detected HyPer7 ratio 488/405 range from low (blue) to high (red) H 2 O 2 <t>concentrations.</t> <t>Ratiometric</t> images visualize spectral changes in response to increasing H 2 O 2 concentrations ( n > 7). Scale bars, overview: 100 μm, insets: 50 μm. Images are maximum intensity Z ‐stack projections processed using <t>RRA</t> software. Insets represent single slice images of corresponding overview Z ‐stack projections. Arrows indicate higher oxidized meristematic zones, disappearing after 2 mM treatments. (C) HyPer7 ratios from the meristematic region (mr) and surrounding differentiated tissue (dt) were determined using representative images ( n = 7) shown in (B). (D) Phenotypic analysis of WT plants after cultivation for 3 days, followed by 10 min H₂O₂ treatment and recovery for 4 days. Plants treated with 10 mM H₂O₂ were non‐viable and excluded from further analysis. Scale bar: 500 μm. (E) Quantitative assessment of the optical surface area of 7‐day‐old WT plants after H₂O₂ treatments ( n > 35). Data are represented as mean ± standard deviation. Statistical significance was determined using the single ANOVA test followed by Tukey ( P < 0.05).
Optical Fibers, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Functional characterization of HyPer7 as H 2 O 2 sensor in 3 DAG gemmae. (A) Plate reader measurements of HyPer7 fluorescence intensity in 3 DAG gemmae. After 10 min, gemmae were submersed in medium with different H 2 O 2 concentrations (0.25–10 mM) for 10 min, followed by recovery measurements for 100 min. Error bars represent standard deviation, calculated from n ≥ 6. Values were normalized to the 488/405 ratio of the first time point. (B) Microscopic images of HyPer7 fluorescence in 3 DAG transgenic gemmae exposed to the H 2 O 2 series. The rainbow color scheme depicts the detected HyPer7 ratio 488/405 range from low (blue) to high (red) H 2 O 2 <t>concentrations.</t> <t>Ratiometric</t> images visualize spectral changes in response to increasing H 2 O 2 concentrations ( n > 7). Scale bars, overview: 100 μm, insets: 50 μm. Images are maximum intensity Z ‐stack projections processed using <t>RRA</t> software. Insets represent single slice images of corresponding overview Z ‐stack projections. Arrows indicate higher oxidized meristematic zones, disappearing after 2 mM treatments. (C) HyPer7 ratios from the meristematic region (mr) and surrounding differentiated tissue (dt) were determined using representative images ( n = 7) shown in (B). (D) Phenotypic analysis of WT plants after cultivation for 3 days, followed by 10 min H₂O₂ treatment and recovery for 4 days. Plants treated with 10 mM H₂O₂ were non‐viable and excluded from further analysis. Scale bar: 500 μm. (E) Quantitative assessment of the optical surface area of 7‐day‐old WT plants after H₂O₂ treatments ( n > 35). Data are represented as mean ± standard deviation. Statistical significance was determined using the single ANOVA test followed by Tukey ( P < 0.05).
Ratio Redox Analysis, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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MathWorks Inc optical reflection matlab
Functional characterization of HyPer7 as H 2 O 2 sensor in 3 DAG gemmae. (A) Plate reader measurements of HyPer7 fluorescence intensity in 3 DAG gemmae. After 10 min, gemmae were submersed in medium with different H 2 O 2 concentrations (0.25–10 mM) for 10 min, followed by recovery measurements for 100 min. Error bars represent standard deviation, calculated from n ≥ 6. Values were normalized to the 488/405 ratio of the first time point. (B) Microscopic images of HyPer7 fluorescence in 3 DAG transgenic gemmae exposed to the H 2 O 2 series. The rainbow color scheme depicts the detected HyPer7 ratio 488/405 range from low (blue) to high (red) H 2 O 2 <t>concentrations.</t> <t>Ratiometric</t> images visualize spectral changes in response to increasing H 2 O 2 concentrations ( n > 7). Scale bars, overview: 100 μm, insets: 50 μm. Images are maximum intensity Z ‐stack projections processed using <t>RRA</t> software. Insets represent single slice images of corresponding overview Z ‐stack projections. Arrows indicate higher oxidized meristematic zones, disappearing after 2 mM treatments. (C) HyPer7 ratios from the meristematic region (mr) and surrounding differentiated tissue (dt) were determined using representative images ( n = 7) shown in (B). (D) Phenotypic analysis of WT plants after cultivation for 3 days, followed by 10 min H₂O₂ treatment and recovery for 4 days. Plants treated with 10 mM H₂O₂ were non‐viable and excluded from further analysis. Scale bar: 500 μm. (E) Quantitative assessment of the optical surface area of 7‐day‐old WT plants after H₂O₂ treatments ( n > 35). Data are represented as mean ± standard deviation. Statistical significance was determined using the single ANOVA test followed by Tukey ( P < 0.05).
Optical Reflection Matlab, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Impact of information campaign (percentage of respondents)
Tubewell Water, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Image Search Results


Functional characterization of HyPer7 as H 2 O 2 sensor in 3 DAG gemmae. (A) Plate reader measurements of HyPer7 fluorescence intensity in 3 DAG gemmae. After 10 min, gemmae were submersed in medium with different H 2 O 2 concentrations (0.25–10 mM) for 10 min, followed by recovery measurements for 100 min. Error bars represent standard deviation, calculated from n ≥ 6. Values were normalized to the 488/405 ratio of the first time point. (B) Microscopic images of HyPer7 fluorescence in 3 DAG transgenic gemmae exposed to the H 2 O 2 series. The rainbow color scheme depicts the detected HyPer7 ratio 488/405 range from low (blue) to high (red) H 2 O 2 concentrations. Ratiometric images visualize spectral changes in response to increasing H 2 O 2 concentrations ( n > 7). Scale bars, overview: 100 μm, insets: 50 μm. Images are maximum intensity Z ‐stack projections processed using RRA software. Insets represent single slice images of corresponding overview Z ‐stack projections. Arrows indicate higher oxidized meristematic zones, disappearing after 2 mM treatments. (C) HyPer7 ratios from the meristematic region (mr) and surrounding differentiated tissue (dt) were determined using representative images ( n = 7) shown in (B). (D) Phenotypic analysis of WT plants after cultivation for 3 days, followed by 10 min H₂O₂ treatment and recovery for 4 days. Plants treated with 10 mM H₂O₂ were non‐viable and excluded from further analysis. Scale bar: 500 μm. (E) Quantitative assessment of the optical surface area of 7‐day‐old WT plants after H₂O₂ treatments ( n > 35). Data are represented as mean ± standard deviation. Statistical significance was determined using the single ANOVA test followed by Tukey ( P < 0.05).

Journal: The Plant Journal

Article Title: Redox buffering and H 2 O 2 orchestrate the vegetative development of Marchantia polymorpha

doi: 10.1111/tpj.70317

Figure Lengend Snippet: Functional characterization of HyPer7 as H 2 O 2 sensor in 3 DAG gemmae. (A) Plate reader measurements of HyPer7 fluorescence intensity in 3 DAG gemmae. After 10 min, gemmae were submersed in medium with different H 2 O 2 concentrations (0.25–10 mM) for 10 min, followed by recovery measurements for 100 min. Error bars represent standard deviation, calculated from n ≥ 6. Values were normalized to the 488/405 ratio of the first time point. (B) Microscopic images of HyPer7 fluorescence in 3 DAG transgenic gemmae exposed to the H 2 O 2 series. The rainbow color scheme depicts the detected HyPer7 ratio 488/405 range from low (blue) to high (red) H 2 O 2 concentrations. Ratiometric images visualize spectral changes in response to increasing H 2 O 2 concentrations ( n > 7). Scale bars, overview: 100 μm, insets: 50 μm. Images are maximum intensity Z ‐stack projections processed using RRA software. Insets represent single slice images of corresponding overview Z ‐stack projections. Arrows indicate higher oxidized meristematic zones, disappearing after 2 mM treatments. (C) HyPer7 ratios from the meristematic region (mr) and surrounding differentiated tissue (dt) were determined using representative images ( n = 7) shown in (B). (D) Phenotypic analysis of WT plants after cultivation for 3 days, followed by 10 min H₂O₂ treatment and recovery for 4 days. Plants treated with 10 mM H₂O₂ were non‐viable and excluded from further analysis. Scale bar: 500 μm. (E) Quantitative assessment of the optical surface area of 7‐day‐old WT plants after H₂O₂ treatments ( n > 35). Data are represented as mean ± standard deviation. Statistical significance was determined using the single ANOVA test followed by Tukey ( P < 0.05).

Article Snippet: A ratiometric analysis was performed by calculating the 405/488 nm ratio for each pixel using the Matlab‐based program Redox Ratio Analysis (RRA), resulting in a false color ratiometric image according to Fricker ( ).

Techniques: Functional Assay, Fluorescence, Standard Deviation, Transgenic Assay, Software

Impact of information campaign (percentage of respondents)

Journal: Journal of Health, Population, and Nutrition

Article Title: Access to Drinking-water and Arsenicosis in Bangladesh

doi:

Figure Lengend Snippet: Impact of information campaign (percentage of respondents)

Article Snippet: Emch found that, in Matlab, the use of tubewell water was associated with a significantly lower level of hospitalization for ‘non-cholera’ diarrhoea, but that sharing of sanitation facilities was a more important factor for hospitalization due to cholera ( ).

Techniques:

Source of drinking-water (percentages)

Journal: Journal of Health, Population, and Nutrition

Article Title: Access to Drinking-water and Arsenicosis in Bangladesh

doi:

Figure Lengend Snippet: Source of drinking-water (percentages)

Article Snippet: Emch found that, in Matlab, the use of tubewell water was associated with a significantly lower level of hospitalization for ‘non-cholera’ diarrhoea, but that sharing of sanitation facilities was a more important factor for hospitalization due to cholera ( ).

Techniques:

Major reasons for installing a  tubewell  (households who have installed their own tubewells)

Journal: Journal of Health, Population, and Nutrition

Article Title: Access to Drinking-water and Arsenicosis in Bangladesh

doi:

Figure Lengend Snippet: Major reasons for installing a tubewell (households who have installed their own tubewells)

Article Snippet: Emch found that, in Matlab, the use of tubewell water was associated with a significantly lower level of hospitalization for ‘non-cholera’ diarrhoea, but that sharing of sanitation facilities was a more important factor for hospitalization due to cholera ( ).

Techniques: Control

Main reasons for not treating water in 2002 (percentages)

Journal: Journal of Health, Population, and Nutrition

Article Title: Access to Drinking-water and Arsenicosis in Bangladesh

doi:

Figure Lengend Snippet: Main reasons for not treating water in 2002 (percentages)

Article Snippet: Emch found that, in Matlab, the use of tubewell water was associated with a significantly lower level of hospitalization for ‘non-cholera’ diarrhoea, but that sharing of sanitation facilities was a more important factor for hospitalization due to cholera ( ).

Techniques: